US_2dsaProcess Class Reference

2DSA Processor object More...

#include "us_2dsa_process.h"

Inheritance diagram for US_2dsaProcess:

Collaboration diagram for US_2dsaProcess:

Public Types
enum	RefineType {   UGRID, LUGRID, RLGRID, SOLCO,   CLIPLO }
	The type of refinement used. More...
enum	TaskState { READY, WORKING, ABORTED }
	The state of a task. More...

Signals
void	progress_update (int)
void	process_complete (int)
void	stage_complete (int, int)
void	message_update (QString, bool)

Public Member Functions
	US_2dsaProcess (QList< SS_DATASET * > &, QObject *=0)
	Create a 2DSA processor object. More...
void	start_fit (double, double, int, double, double, int, int, int, int)
	Start the fit calculations. More...
void	set_iters (int, int, int, double, double, double, int)
	Set up iteration-related parameters for a fit. More...
bool	get_results (US_DataIO::RawData *, US_DataIO::RawData *, US_Model *, US_Noise *, US_Noise *)
	Get results upon completion of all refinements. More...
void	stop_fit (void)
	Stop the current fit processing. More...
void	clear_data (void)
	Clear all data memory for the processor. More...
int	estimate_steps (int)
	Estimate progress steps after depth 0. More...
QString	lastError (void)
	Get message for last error. More...

Static Public Attributes
static const int	solute_doubles = sizeof( US_Solute ) / sizeof( double )

Private Slots
void	queue_task (WorkPacket2D &, double, double, int, int, int, QVector< US_Solute >)
void	process_job (WorkerThread2D *)
void	process_final (WorkerThread2D *)
void	step_progress (int)
void	final_computes (void)
void	iterate (void)
void	set_meniscus (void)
void	set_monteCarlo (void)
void	set_gaussians (void)
void	requeue_tasks (void)
void	submit_job (WorkPacket2D &, int)
void	free_worker (int)
int	running_at_depth (int)
int	queued_at_depth (int)
int	jobs_at_depth (int)
QString	pmessage_head (void)
WorkPacket2D	next_job (void)
bool	memory_check (void)

Private Member Functions
long int	max_rss (void)

Private Attributes
QList< SS_DATASET * > &	dsets
long int	maxrss
QList< WorkerThread2D * >	wthreads
QList< WorkPacket2D >	job_queue
QVector< int >	wkstates
QVector< int >	wkdepths
QVector< int >	tkdepths
QVector< double >	sigmas
QList< double >	itvaris
QList< QVector< US_Solute > >	c_solutes
QList< QVector< US_Solute > >	orig_sols
QList< QVector< US_Solute > >	ical_sols
US_DataIO::EditedData *	edata
US_DataIO::EditedData *	bdata
US_DataIO::EditedData	wdata
US_DataIO::RawData	sdata
US_DataIO::RawData	sdata1
US_DataIO::RawData	rdata
US_Model	model
US_Noise	ti_noise
US_Noise	ri_noise
US_SimulationParameters *	simparms
QObject *	parentw
QString	errMsg
int	dbg_level
int	nthreads
int	nssteps
int	nksteps
int	ngrefine
int	jgrefine
int	nctotal
int	kcsteps
int	noisflag
int	nscans
int	npoints
int	nsubgrid
int	kctask
int	kstask
int	mmiters
int	mmtype
int	maxtsols
int	mintsols
int	maxdepth
int	maxiters
int	r_iter
int	mm_iter
int	ntisols
int	ntcsols
bool	abort
bool	fnoionly
double	slolim
double	suplim
double	klolim
double	kuplim
double	gdelta_s
double	gdelta_k
double	sdelta_s
double	sdelta_k
double	varitol
double	menrange
double	cnstff0
QTime	timer

Detailed Description

2DSA Processor object

This class sets up a set of 2DSA simulations for a grid across an s and k range. It divides the refinements in the grid across a specified number of worker threads.

Definition at line 33 of file us_2dsa_process.h.

Member Enumeration Documentation

enum US_2dsaProcess::RefineType

The type of refinement used.

Enumerator
UGRID
LUGRID
RLGRID
SOLCO
CLIPLO

Definition at line 40 of file us_2dsa_process.h.

enum US_2dsaProcess::TaskState

The state of a task.

Enumerator
READY
WORKING
ABORTED

Definition at line 43 of file us_2dsa_process.h.

Constructor & Destructor Documentation

US_2dsaProcess::US_2dsaProcess	(	QList< SS_DATASET * > &	dsets,
		QObject *	parent = 0
	)

Create a 2DSA processor object.

Parameters

dsets	Pointer to input experiment data
parent	Pointer to parent object

Definition at line 15 of file us_2dsa_process.cpp.

Member Function Documentation

void US_2dsaProcess::clear_data

(

void

)

Clear all data memory for the processor.

Definition at line 360 of file us_2dsa_process.cpp.

int US_2dsaProcess::estimate_steps

(

int

ncsol

)

Estimate progress steps after depth 0.

Parameters

ncsol

Number of last calculated solutes

Returns

Number of estimated remaining steps

Definition at line 1217 of file us_2dsa_process.cpp.

void US_2dsaProcess::final_computes ( void  )

privateslot

Definition at line 384 of file us_2dsa_process.cpp.

void US_2dsaProcess::free_worker ( int  tx )

privateslot

Definition at line 1198 of file us_2dsa_process.cpp.

bool US_2dsaProcess::get_results	(	US_DataIO::RawData *	da_sim,
		US_DataIO::RawData *	da_res,
		US_Model *	da_mdl,
		US_Noise *	da_tin,
		US_Noise *	da_rin
	)

Get results upon completion of all refinements.

Parameters

da_sim	Calculated simulation data
da_res	Residuals data (exper - simul)
da_mdl	Composite model
da_tin	Time-invariant noise (or null)
da_rin	Radially-invariant noise (or null)

Returns

Success flag: true if successful

Definition at line 786 of file us_2dsa_process.cpp.

void US_2dsaProcess::iterate ( void  )

privateslot

Definition at line 1091 of file us_2dsa_process.cpp.

int US_2dsaProcess::jobs_at_depth ( int  depth )

privateslot

Definition at line 1297 of file us_2dsa_process.cpp.

QString US_2dsaProcess::lastError ( void  )

inline

Get message for last error.

Returns

Message about last error

Definition at line 96 of file us_2dsa_process.h.

long int US_2dsaProcess::max_rss ( void  )

private

Definition at line 49 of file us_2dsa_process.cpp.

bool US_2dsaProcess::memory_check ( void  )

privateslot

Definition at line 1488 of file us_2dsa_process.cpp.

void US_2dsaProcess::message_update ( QString  , bool    )

signal

WorkPacket2D US_2dsaProcess::next_job ( void  )

privateslot

Definition at line 1454 of file us_2dsa_process.cpp.

QString US_2dsaProcess::pmessage_head ( void  )

privateslot

Definition at line 1447 of file us_2dsa_process.cpp.

void US_2dsaProcess::process_complete ( int  )

signal

void US_2dsaProcess::process_final ( WorkerThread2D *  wthrd )

privateslot

Definition at line 444 of file us_2dsa_process.cpp.

void US_2dsaProcess::process_job ( WorkerThread2D *  wthrd )

privateslot

Definition at line 838 of file us_2dsa_process.cpp.

void US_2dsaProcess::progress_update ( int  )

signal

void US_2dsaProcess::queue_task ( WorkPacket2D &  wtask, double  llss, double  llsk, int  taskx, int  depth, int  noisf, QVector< US_Solute >  isolutes  )

privateslot

Definition at line 1052 of file us_2dsa_process.cpp.

int US_2dsaProcess::queued_at_depth ( int  depth )

privateslot

Definition at line 1267 of file us_2dsa_process.cpp.

void US_2dsaProcess::requeue_tasks ( void  )

privateslot

Definition at line 1355 of file us_2dsa_process.cpp.

int US_2dsaProcess::running_at_depth ( int  depth )

privateslot

Definition at line 1281 of file us_2dsa_process.cpp.

void US_2dsaProcess::set_gaussians ( void  )

privateslot

Definition at line 1396 of file us_2dsa_process.cpp.

void US_2dsaProcess::set_iters	(	int	mxiter,
		int	mciter,
		int	mniter,
		double	vtoler,
		double	menrng,
		double	cff0,
		int	jgref
	)

Set up iteration-related parameters for a fit.

Parameters

mxiter	Maximum refinement iterations
mciter	Number of monte carlo iterations
mniter	Number of meniscus iterations
vtoler	Variance difference tolerance
menrng	Meniscus range
cff0	Constant f/f0 (or 0.0)
jgref	Flag of refine/solute type

Definition at line 295 of file us_2dsa_process.cpp.

void US_2dsaProcess::set_meniscus ( void  )

privateslot

Definition at line 1303 of file us_2dsa_process.cpp.

void US_2dsaProcess::set_monteCarlo ( void  )

privateslot

Definition at line 1319 of file us_2dsa_process.cpp.

void US_2dsaProcess::stage_complete ( int  , int    )

signal

void US_2dsaProcess::start_fit	(	double	sll,
		double	sul,
		int	nss,
		double	kll,
		double	kul,
		int	nks,
		int	ngr,
		int	nthr,
		int	noif
	)

Start the fit calculations.

Parameters

sll	s lower limit
sul	s upper limit
nss	number of s steps
kll	k lower limit
kul	k upper limit
nks	number of k steps
ngr	number of grid refinements
nthr	number of threads
noif	noise flag: 0-3 for none|ti|ri|both

Definition at line 55 of file us_2dsa_process.cpp.

void US_2dsaProcess::step_progress ( int  ksteps )

privateslot

Definition at line 374 of file us_2dsa_process.cpp.

void US_2dsaProcess::stop_fit

(

void

)

Stop the current fit processing.

Definition at line 321 of file us_2dsa_process.cpp.

void US_2dsaProcess::submit_job ( WorkPacket2D &  wtask, int  thrx  )

privateslot

Definition at line 813 of file us_2dsa_process.cpp.

Member Data Documentation

bool US_2dsaProcess::abort

private

Definition at line 176 of file us_2dsa_process.h.

US_DataIO::EditedData* US_2dsaProcess::bdata

private

Definition at line 132 of file us_2dsa_process.h.

QList< QVector< US_Solute > > US_2dsaProcess::c_solutes

private

Definition at line 127 of file us_2dsa_process.h.

double US_2dsaProcess::cnstff0

private

Definition at line 189 of file us_2dsa_process.h.

int US_2dsaProcess::dbg_level

private

Definition at line 151 of file us_2dsa_process.h.

QList< SS_DATASET* >& US_2dsaProcess::dsets

private

Definition at line 110 of file us_2dsa_process.h.

US_DataIO::EditedData* US_2dsaProcess::edata

private

Definition at line 131 of file us_2dsa_process.h.

QString US_2dsaProcess::errMsg

private

Definition at line 149 of file us_2dsa_process.h.

bool US_2dsaProcess::fnoionly

private

Definition at line 177 of file us_2dsa_process.h.

double US_2dsaProcess::gdelta_k

private

Definition at line 184 of file us_2dsa_process.h.

double US_2dsaProcess::gdelta_s

private

Definition at line 183 of file us_2dsa_process.h.

QList< QVector< US_Solute > > US_2dsaProcess::ical_sols

private

Definition at line 129 of file us_2dsa_process.h.

QList< double > US_2dsaProcess::itvaris

private

Definition at line 125 of file us_2dsa_process.h.

int US_2dsaProcess::jgrefine

private

Definition at line 156 of file us_2dsa_process.h.

QList< WorkPacket2D > US_2dsaProcess::job_queue

private

Definition at line 117 of file us_2dsa_process.h.

int US_2dsaProcess::kcsteps

private

Definition at line 158 of file us_2dsa_process.h.

int US_2dsaProcess::kctask

private

Definition at line 163 of file us_2dsa_process.h.

double US_2dsaProcess::klolim

private

Definition at line 181 of file us_2dsa_process.h.

int US_2dsaProcess::kstask

private

Definition at line 164 of file us_2dsa_process.h.

double US_2dsaProcess::kuplim

private

Definition at line 182 of file us_2dsa_process.h.

int US_2dsaProcess::maxdepth

private

Definition at line 169 of file us_2dsa_process.h.

int US_2dsaProcess::maxiters

private

Definition at line 170 of file us_2dsa_process.h.

long int US_2dsaProcess::maxrss

private

Definition at line 112 of file us_2dsa_process.h.

int US_2dsaProcess::maxtsols

private

Definition at line 167 of file us_2dsa_process.h.

double US_2dsaProcess::menrange

private

Definition at line 188 of file us_2dsa_process.h.

int US_2dsaProcess::mintsols

private

Definition at line 168 of file us_2dsa_process.h.

int US_2dsaProcess::mm_iter

private

Definition at line 172 of file us_2dsa_process.h.

int US_2dsaProcess::mmiters

private

Definition at line 165 of file us_2dsa_process.h.

int US_2dsaProcess::mmtype

private

Definition at line 166 of file us_2dsa_process.h.

US_Model US_2dsaProcess::model

private

Definition at line 140 of file us_2dsa_process.h.

int US_2dsaProcess::nctotal

private

Definition at line 157 of file us_2dsa_process.h.

int US_2dsaProcess::ngrefine

private

Definition at line 155 of file us_2dsa_process.h.

int US_2dsaProcess::nksteps

private

Definition at line 154 of file us_2dsa_process.h.

int US_2dsaProcess::noisflag

private

Definition at line 159 of file us_2dsa_process.h.

int US_2dsaProcess::npoints

private

Definition at line 161 of file us_2dsa_process.h.

int US_2dsaProcess::nscans

private

Definition at line 160 of file us_2dsa_process.h.

int US_2dsaProcess::nssteps

private

Definition at line 153 of file us_2dsa_process.h.

int US_2dsaProcess::nsubgrid

private

Definition at line 162 of file us_2dsa_process.h.

int US_2dsaProcess::ntcsols

private

Definition at line 174 of file us_2dsa_process.h.

int US_2dsaProcess::nthreads

private

Definition at line 152 of file us_2dsa_process.h.

int US_2dsaProcess::ntisols

private

Definition at line 173 of file us_2dsa_process.h.

QList< QVector< US_Solute > > US_2dsaProcess::orig_sols

private

Definition at line 128 of file us_2dsa_process.h.

QObject* US_2dsaProcess::parentw

private

Definition at line 147 of file us_2dsa_process.h.

int US_2dsaProcess::r_iter

private

Definition at line 171 of file us_2dsa_process.h.

US_DataIO::RawData US_2dsaProcess::rdata

private

Definition at line 138 of file us_2dsa_process.h.

US_Noise US_2dsaProcess::ri_noise

private

Definition at line 143 of file us_2dsa_process.h.

US_DataIO::RawData US_2dsaProcess::sdata

private

Definition at line 135 of file us_2dsa_process.h.

US_DataIO::RawData US_2dsaProcess::sdata1

private

Definition at line 136 of file us_2dsa_process.h.

double US_2dsaProcess::sdelta_k

private

Definition at line 186 of file us_2dsa_process.h.

double US_2dsaProcess::sdelta_s

private

Definition at line 185 of file us_2dsa_process.h.

QVector< double > US_2dsaProcess::sigmas

private

Definition at line 123 of file us_2dsa_process.h.

US_SimulationParameters* US_2dsaProcess::simparms

private

Definition at line 145 of file us_2dsa_process.h.

double US_2dsaProcess::slolim

private

Definition at line 179 of file us_2dsa_process.h.

const int US_2dsaProcess::solute_doubles = sizeof( US_Solute ) / sizeof( double )

static

Definition at line 99 of file us_2dsa_process.h.

double US_2dsaProcess::suplim

private

Definition at line 180 of file us_2dsa_process.h.

US_Noise US_2dsaProcess::ti_noise

private

Definition at line 142 of file us_2dsa_process.h.

QTime US_2dsaProcess::timer

private

Definition at line 191 of file us_2dsa_process.h.

QVector< int > US_2dsaProcess::tkdepths

private

Definition at line 121 of file us_2dsa_process.h.

double US_2dsaProcess::varitol

private

Definition at line 187 of file us_2dsa_process.h.

US_DataIO::EditedData US_2dsaProcess::wdata

private

Definition at line 133 of file us_2dsa_process.h.

QVector< int > US_2dsaProcess::wkdepths

private

Definition at line 120 of file us_2dsa_process.h.

QVector< int > US_2dsaProcess::wkstates

private

Definition at line 119 of file us_2dsa_process.h.

QList< WorkerThread2D* > US_2dsaProcess::wthreads

private

Definition at line 116 of file us_2dsa_process.h.

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The documentation for this class was generated from the following files:

• us_2dsa_process.h
• us_2dsa_process.cpp